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JT27_16305 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_16305" - Membrane protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
JT27_16305Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (165 aa)    
Predicted Functional Partners:
JT27_16310
Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method- Protein Homology (336 aa)
 
 
  0.991
rpoE
RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily (200 aa)
   
 
  0.942
JT27_16315
Periplasmic serine endoprotease DegP-like; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S1C family (502 aa)
   
 
  0.875
JT27_16290
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (410 aa)
         
  0.860
JT27_16295
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (134 aa)
              0.845
JT27_11215
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
   
          0.769
JT27_03880
Flagellar assembly protein FliT; Derived by automated computational analysis using gene prediction method- Protein Homology (111 aa)
   
          0.752
JT27_10720
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
   
          0.714
JT27_14865
Lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology (239 aa)
   
          0.686
JT27_11225
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
   
          0.676
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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