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JT27_16725 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_16725" - Lipoprotein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_16725Lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology (215 aa)    
Predicted Functional Partners:
JT27_16720
Derived by automated computational analysis using gene prediction method- Protein Homology (892 aa)
              0.722
JT27_13980
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (111 aa)
   
          0.697
fbp
Fructose-1,6-bisphosphatase class 1; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the FBPase class 1 family (341 aa)
              0.658
JT27_16305
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (165 aa)
   
          0.638
JT27_03880
Flagellar assembly protein FliT; Derived by automated computational analysis using gene prediction method- Protein Homology (111 aa)
   
          0.626
JT27_10720
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
   
          0.613
JT27_11225
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
   
          0.607
JT27_11215
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
   
          0.606
JT27_16575
Glycosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (586 aa)
   
          0.596
JT27_10175
Phospholipase; Derived by automated computational analysis using gene prediction method- Protein Homology (434 aa)
   
          0.575
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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