STRINGSTRING
JT27_17285 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_17285" - Murein transglycosylase in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_17285Murein transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology (397 aa)    
Predicted Functional Partners:
JT27_17290
Deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (307 aa)
              0.655
bamD
Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (258 aa)
   
      0.649
JT27_19705
Murein transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology (469 aa)
 
   
  0.630
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (486 aa)
   
   
  0.616
lptD
LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (776 aa)
 
        0.607
bamE
Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (195 aa)
 
 
      0.541
JT27_17295
Electron transporter RnfB; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
 
          0.541
JT27_17300
Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)
 
          0.530
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (67 aa)
   
          0.509
JT27_10710
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (348 aa)
 
        0.475
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (13%) [HD]