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JT27_17475 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_17475" - Membrane protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_17475Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (84 aa)    
Predicted Functional Partners:
JT27_17470
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (67 aa)
 
          0.904
JT27_17455
Cytochrome oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (57 aa)
 
          0.870
JT27_17465
Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (499 aa)
 
          0.839
JT27_17460
Cbb3-type cytochrome c oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex (305 aa)
 
          0.789
JT27_19065
Tricarboxylate transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (152 aa)
   
          0.694
JT27_17445
Cbb3-type cytochrome c oxidase subunit I; CcoN; FixN; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the heme-copper respiratory oxidase family (495 aa)
 
          0.676
JT27_18820
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method- Protein Homology (139 aa)
   
          0.657
JT27_17450
Peptidase S41; Derived by automated computational analysis using gene prediction method- Protein Homology (219 aa)
 
          0.636
JT27_04410
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (176 aa)
   
          0.599
JT27_11225
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
   
          0.583
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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