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JT27_17620 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_17620" - Membrane protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_17620Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (136 aa)    
Predicted Functional Partners:
JT27_17615
UPF0061 protein JT27_17615; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0061 (SELO) family (488 aa)
              0.850
JT27_17625
UPF0761 membrane protein JT27_17625; Derived by automated computational analysis using gene prediction method- Protein Homology (459 aa)
              0.754
JT27_01950
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (104 aa)
   
          0.708
JT27_17630
CBS domain-containing protein; Derived by automated computational analysis using gene prediction method- Protein Homology (153 aa)
 
          0.686
JT27_13565
Spermidine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)
   
          0.661
JT27_06105
Cytochrome C biogenesis protein ResB; Derived by automated computational analysis using gene prediction method- Protein Homology (680 aa)
   
          0.654
JT27_04385
Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
   
          0.651
JT27_07740
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (194 aa)
   
          0.650
JT27_06555
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (290 aa)
   
          0.632
JT27_07980
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (1313 aa)
 
          0.627
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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