STRINGSTRING
JT27_18095 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_18095" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_18095Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (78 aa)    
Predicted Functional Partners:
JT27_18105
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (75 aa)
              0.842
JT27_18100
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (122 aa)
              0.842
JT27_18110
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (140 aa)
              0.629
JT27_18090
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (120 aa)
              0.584
JT27_18085
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (172 aa)
              0.584
JT27_18125
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (87 aa)
              0.483
JT27_18120
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (80 aa)
              0.483
JT27_18115
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (64 aa)
              0.483
JT27_18080
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (111 aa)
              0.412
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (17%) [HD]