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JT27_18215 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_18215" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_18215Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)    
Predicted Functional Partners:
JT27_18210
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (69 aa)
              0.845
JT27_18240
Uncharacterized protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) (243 aa)
              0.727
JT27_18235
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (282 aa)
              0.727
JT27_18230
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (649 aa)
              0.727
JT27_18225
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (94 aa)
              0.727
JT27_18220
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (116 aa)
              0.727
rsfS
Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (134 aa)
 
          0.601
hflX
GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis (362 aa)
   
        0.557
JT27_18245
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (511 aa)
   
        0.556
ybeY
Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (159 aa)
 
 
  0.500
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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