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JT27_18300 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_18300" - Uncharacterized protein in Alcaligenes faecalis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
JT27_18300Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (577 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (905 aa)
   
 
  0.593
JT27_09435
Helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (684 aa)
 
 
  0.557
JT27_18290
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (392 aa)
   
   
  0.517
JT27_13030
DNA polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology (572 aa)
 
     
  0.503
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1420 aa)
     
 
  0.501
JT27_00750
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (761 aa)
   
 
  0.500
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1370 aa)
     
 
  0.475
JT27_13010
ATP-dependent endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (582 aa)
   
        0.468
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (327 aa)
     
 
  0.457
valS
Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a "posttransfer" editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily (950 aa)
   
      0.451
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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