STRINGSTRING
JT27_18490 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_18490" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_18490Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (150 aa)    
Predicted Functional Partners:
JT27_18485
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (214 aa)
              0.845
JT27_18480
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (159 aa)
              0.845
JT27_18475
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (180 aa)
              0.845
JT27_18470
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
              0.811
JT27_18465
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (150 aa)
              0.679
JT27_18495
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (348 aa)
              0.618
JT27_18460
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (84 aa)
              0.503
JT27_18455
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (203 aa)
              0.503
JT27_18450
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (94 aa)
              0.469
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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