STRINGSTRING
AFA_09105 protein (Alcaligenes faecalis) - STRING interaction network
"AFA_09105" - Chemotaxis protein MotA in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFA_09105Chemotaxis protein MotA; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)    
Predicted Functional Partners:
JT27_18750
Flagellar motor protein; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
 
  0.998
JT27_03655
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method- Protein Homology (693 aa)
 
   
  0.929
motB
Flagellar motor protein MotB; With MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)
 
 
  0.912
JT27_03645
Flagellar motor protein MotA; With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)
         
  0.806
JT27_03820
Flagellar motor switch protein FliN; Derived by automated computational analysis using gene prediction method- Protein Homology (167 aa)
 
   
  0.786
JT27_03915
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (398 aa)
 
   
  0.757
fliG
One of three proteins involved in switching the direction of the flagellar rotation; Derived by automated computational analysis using gene prediction method- Protein Homology (336 aa)
 
   
  0.745
flgC
Flagellar basal-body rod protein FlgC; With FlgF and B makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method- Protein Homology (134 aa)
 
   
  0.729
flgK
Flagellar hook-associated protein 1; Derived by automated computational analysis using gene prediction method- Protein Homology (571 aa)
 
   
  0.723
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin (383 aa)
 
   
  0.713
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (7%) [HD]