STRINGSTRING
JT27_18780 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_18780" - Succinylglutamate desuccinylase in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_18780Succinylglutamate desuccinylase; Derived by automated computational analysis using gene prediction method- Protein Homology (319 aa)    
Predicted Functional Partners:
JT27_18775
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)
 
          0.828
JT27_18770
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
 
          0.622
JT27_18790
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (139 aa)
 
          0.613
JT27_18785
Ser/Thr-rich protein T10; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
              0.544
murE
Multifunctional fusion protein; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan; Belongs to the MurCDEF family. MurE subfamily (925 aa)
   
   
  0.529
JT27_20005
Cupin; Derived by automated computational analysis using gene prediction method- Protein Homology (126 aa)
 
          0.475
JT27_18820
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method- Protein Homology (139 aa)
   
          0.449
JT27_04410
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (176 aa)
   
          0.447
JT27_15885
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (190 aa)
 
          0.421
JT27_18765
D-alanyl-D-alanine endopeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S11 family (254 aa)
              0.417
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (8%) [HD]