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JT27_18875 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_18875" - Alcohol dehydrogenase in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_18875Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (452 aa)    
Predicted Functional Partners:
JT27_18880
Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
 
 
  0.993
JT27_20275
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (752 aa)
        0.929
JT27_04275
Derived by automated computational analysis using gene prediction method- Protein Homology (362 aa)
 
 
  0.756
JT27_10210
Cytochrome C, class I; Derived by automated computational analysis using gene prediction method- Protein Homology (138 aa)
 
          0.706
JT27_17460
Cbb3-type cytochrome c oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex (305 aa)
 
            0.651
JT27_04270
Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
     
  0.605
JT27_06540
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (535 aa)
   
 
  0.488
JT27_06525
MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)
   
 
  0.469
JT27_15570
Derived by automated computational analysis using gene prediction method- Protein Homology (107 aa)
 
     
  0.458
JT27_08295
Nitric oxide reductase large subunit; Derived by automated computational analysis using gene prediction method- Protein Homology (759 aa)
     
 
  0.450
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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