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JT27_19065 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_19065" - Tricarboxylate transporter in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
JT27_19065Tricarboxylate transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (152 aa)    
Predicted Functional Partners:
JT27_19070
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (501 aa)
 
          0.855
JT27_17475
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (84 aa)
   
          0.694
JT27_08410
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)
 
          0.678
JT27_05055
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (325 aa)
 
          0.663
JT27_20210
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (323 aa)
 
          0.630
JT27_18775
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)
 
          0.627
JT27_10550
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (331 aa)
 
          0.621
JT27_17455
Cytochrome oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (57 aa)
   
          0.619
JT27_11225
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
   
          0.600
JT27_04035
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (322 aa)
 
          0.569
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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