STRINGSTRING
cpoB protein (Alcaligenes faecalis) - STRING interaction network
"cpoB" - Cell division coordinator CpoB in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpoBCell division coordinator CpoB; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division (229 aa)    
Predicted Functional Partners:
tolB
Protein TolB; Involved in the TonB-independent uptake of proteins (436 aa)
 
   
  0.928
JT27_19145
Peptidoglycan-associated lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ompA family (167 aa)
 
 
  0.891
JT27_19135
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (372 aa)
 
 
  0.860
tolQ
Protein TolQ; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
 
     
  0.720
murE
Multifunctional fusion protein; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan; Belongs to the MurCDEF family. MurE subfamily (925 aa)
   
     
  0.656
rlpA
Endolytic peptidoglycan transglycosylase RlpA; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides (362 aa)
   
   
  0.648
JT27_19120
Acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (141 aa)
   
   
  0.634
JT27_19130
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method- Protein Homology (148 aa)
 
   
  0.628
JT27_19155
Hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (268 aa)
              0.599
JT27_13670
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (652 aa)
 
 
  0.578
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (9%) [HD]