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JT27_19405 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_19405" - AsmA family protein 2 in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
JT27_19405AsmA family protein 2; Derived by automated computational analysis using gene prediction method- Protein Homology (902 aa)    
Predicted Functional Partners:
JT27_19400
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (115 aa)
 
     
  0.872
JT27_10720
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
   
          0.735
JT27_04325
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (267 aa)
 
        0.731
AFA_03375
Barstar family protein 2; Derived by automated computational analysis using gene prediction method- Protein Homology (155 aa)
   
        0.727
JT27_11940
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1352 aa)
 
   
  0.690
JT27_04470
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (170 aa)
   
          0.681
JT27_11785
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (453 aa)
   
          0.679
JT27_17695
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (420 aa)
   
          0.671
JT27_05960
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1342 aa)
         
  0.655
JT27_11225
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
   
          0.618
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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