STRINGSTRING
JT27_19505 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_19505" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_19505Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (704 aa)    
Predicted Functional Partners:
JT27_19500
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (78 aa)
              0.837
JT27_19495
Derived by automated computational analysis using gene prediction method- Protein Homology (715 aa)
 
          0.806
JT27_14770
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (650 aa)
   
          0.521
JT27_14160
Derived by automated computational analysis using gene prediction method- Protein Homology (725 aa)
 
          0.516
JT27_14780
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (563 aa)
   
          0.512
JT27_14855
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (671 aa)
   
          0.506
JT27_08880
Cupin; Derived by automated computational analysis using gene prediction method- Protein Homology (176 aa)
   
          0.496
JT27_06265
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (102 aa)
   
          0.445
JT27_00730
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (845 aa)
 
      0.444
JT27_18920
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method- Protein Homology (436 aa)
   
          0.441
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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