STRINGSTRING
dctA protein (Alcaligenes faecalis) - STRING interaction network
"dctA" - C4-dicarboxylate transport protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctAC4-dicarboxylate transport protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane (463 aa)    
Predicted Functional Partners:
JT27_19655
C4-dicarboxylate transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (600 aa)
 
   
  0.580
JT27_10645
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (506 aa)
   
   
  0.526
JT27_19660
Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (446 aa)
 
     
  0.522
JT27_09535
Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (127 aa)
     
   
  0.488
JT27_05960
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1342 aa)
   
   
  0.464
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1257 aa)
     
   
  0.451
JT27_11130
Malate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (764 aa)
   
   
  0.435
JT27_10545
Malate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (762 aa)
   
   
  0.435
JT27_09480
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method- Protein Homology (764 aa)
   
   
  0.435
JT27_10690
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (409 aa)
   
        0.410
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (9%) [HD]