STRINGSTRING
JT27_19840 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_19840" - Ferric uptake regulation protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_19840Ferric uptake regulation protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Fur family (163 aa)    
Predicted Functional Partners:
JT27_19850
Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (299 aa)
   
   
  0.726
JT27_19845
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
   
   
  0.661
JT27_19855
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 9 family (349 aa)
         
  0.646
JT27_19835
Cobalamin biosynthesis protein CobW; Derived by automated computational analysis using gene prediction method- Protein Homology (366 aa)
         
  0.542
dksA
RNA polymerase-binding transcription factor DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters (145 aa)
         
  0.451
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (905 aa)
         
  0.441
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (9%) [HD]