STRINGSTRING
JT27_20110 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_20110" - 3-phenylpropionate dioxygenase in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_201103-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (425 aa)    
Predicted Functional Partners:
JT27_20115
Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method- Protein Homology (104 aa)
  0.985
JT27_14500
2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
 
 
  0.933
JT27_14505
3-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (106 aa)
  0.931
JT27_20105
Biphenyl 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (429 aa)
          0.916
JT27_14515
3-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (452 aa)
 
    0.849
JT27_14510
3-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (182 aa)
 
   
    0.845
AFA_15730
Rubredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (54 aa)
 
  0.838
JT27_20100
Dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (172 aa)
 
          0.720
JT27_11470
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (973 aa)
 
   
  0.646
JT27_12180
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (114 aa)
 
  0.543
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (7%) [HD]