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JT27_20145 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_20145" - ABC transporter ATP-binding protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
JT27_20145ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)    
Predicted Functional Partners:
JT27_20140
NMT1/THI5-like family protein 3; Derived by automated computational analysis using gene prediction method- Protein Homology (339 aa)
 
   
  0.961
JT27_20150
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (246 aa)
   
  0.948
JT27_02545
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (255 aa)
   
  0.823
JT27_16800
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
   
  0.743
JT27_02730
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
   
  0.730
JT27_02735
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (245 aa)
   
  0.722
JT27_07695
Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)
   
  0.713
JT27_05870
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
   
  0.701
JT27_20135
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (395 aa)
              0.701
JT27_20130
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
              0.694
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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