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rnz protein (Alcaligenes faecalis) - STRING interaction network
"rnz" - Ribonuclease Z in Alcaligenes faecalis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnzRibonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (297 aa)    
Predicted Functional Partners:
JT27_20200
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (324 aa)
              0.778
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily (689 aa)
 
 
  0.535
JT27_20190
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (248 aa)
              0.483
JT27_07735
Methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (449 aa)
   
   
  0.419
JT27_01635
Endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (280 aa)
     
 
  0.405
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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