STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_06810Septum formation initiator family protein. (114 aa)    
Predicted Functional Partners:
CSE_06800
Putative RNA binding protein.
       0.732
CSE_06820
Hypothetical protein.
       0.714
CSE_06830
Ferredoxin.
       0.531
porC
Pyruvate synthase subunit PorC; Protein synonym:pyruvate oxidoreductase gamma chain; protein synonym:pyruvic-ferredoxin oxidoreductase subunit gamma.
       0.433
porD
Pyruvate synthase subunit PorD; Protein synonym:pyruvate oxidoreductase delta chain; protein synonym:pyruvic-ferredoxin oxidoreductase subunit delta.
       0.433
porA
Pyruvate synthase subunit PorA; Protein synonym:pyruvate oxidoreductase alpha chain; protein synonym:pyruvic-ferredoxin oxidoreductase subunit alpha.
       0.428
porB
Pyruvate synthase subunit PorB; Protein synonym:pyruvate oxidoreductase beta chain; protein synonym:pyruvic-ferredoxin oxidoreductase subunit beta.
       0.420
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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