STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_11980Putative two-component system sensor histidine kinase. (181 aa)    
Predicted Functional Partners:
CSE_11970
Hypothetical protein.
 
   
 0.948
CSE_12020
Hypothetical protein.
 
  
 0.884
CSE_12010
Hypothetical protein.
 
     0.865
CSE_11960
Putative NADH dehydrogenase subunit.
 
  
 0.843
CSE_11940
Putative formate dehydrogenase beta subunit.
  
  
 0.822
acoC
Acetoin dehydrogenase E2 component; Protein synonym:dihydrolipoamide acetyltransferase.
    
 0.803
CSE_11950
Putative formate dehydrogenase gamma subunit.
     
 0.788
CSE_11990
Putative NADH dehydrogenase subunit.
     
 0.788
CSE_11930
Putative formate dehydrogenase alpha subunit.
     
 0.787
mobA
Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
  
    0.740
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.