STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSE_15310Putative glycosyltransferase. (364 aa)    
Predicted Functional Partners:
CSE_15290
Putative glycosyltransferase.
  
 0.912
CSE_15300
Putative glycosyltransferase.
 
    
0.835
CSE_15330
Putative glycosyltransferase.
 
    
0.834
CSE_10900
Putative glycoside hydrolase; Belongs to the glycosyl hydrolase 57 family.
 
  
 0.833
CSE_07550
Putative polysaccharide pyruvyl transferase.
 
  
 0.814
CSE_15320
Putative glycosyltransferase.
     
 0.796
CSE_15350
Putative glycosyltransferase.
 
  
 0.687
CSE_15340
Hypothetical protein.
       0.645
galE
Protein synonym:UDP-galactose 4-epimerase.
 
   
 0.585
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
 
 0.555
Your Current Organism:
Caldisericum exile
NCBI taxonomy Id: 511051
Other names: C. exile AZM16c01, Caldisericum exile AZM16c01, filamentous bacterium AZM16c01
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