STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yaeHDUF3461 domain-containing protein YaeH; Belongs to the UPF0325 family (128 aa)    
Predicted Functional Partners:
ytfK
annotation not available
  
   
 0.911
ydcH
annotation not available
   
  
 0.887
ybjM
annotation not available
      
 0.783
yhjA
Putative cytochrome c peroxidase; Protein involved in cytochrome complex assembly
      
 0.740
frsA
Fermentation-respiration switch protein; Displays esterase activity toward pNP-butyrate
  
     0.714
ydeN
Putative ser-type periplasmic non-aryl sulfatase; Belongs to the sulfatase family
      
 0.705
yaiA
annotation not available
      
 0.692
ytfP
Gamma-glutamylamine cyclotransferase family protein ytfp; May play a role in antibiotic biosynthesis
  
     0.692
uspA
Universal stress global stress response regulator; Required for resistance to DNA-damaging agents
  
  
 0.674
yijD
annotation not available
  
     0.644
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.