STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
insI1Transposase InsI for insertion sequence element IS30A; Required for the transposition of the insertion element. (383 aa)    
Predicted Functional Partners:
insD1-2
Pseudogene, autotransporter homolog; interrupted by IS2 and IS30.
     
 0.738
insD1-4
Pseudogene, orgA family, part of T3SS PAI ETT2 remnant.
     
 0.738
yhhH
Putative NTF2 fold immunity protein for polymorphic toxin RhsB.
      
 0.644
insJ
IS150 transposase A; Belongs to the IS150/IS1296 orfA family.
     
 0.623
modF
Molybdate ABC transporter ATPase; Probably not involved in the transport of molybdenum into the cell; Belongs to the ABC transporter superfamily.
      
 0.616
ynbC
Putative esterase.
      
 0.600
insC1-5
Pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein.
     
 0.550
insC1-6
Pseudogene, integrase homology;IS, phage, Tn; Phage-related functions and prophages; KpLE2 phage-like element; P4-like integrase.
     
 0.550
insD1
IS2 transposase TnpB; Involved in the transposition of the insertion sequence IS2.
     
 0.546
insD1-5
IS2 transposase TnpB.
     
 0.546
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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