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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yahCannotation not available (165 aa)    
Predicted Functional Partners:
yahE
annotation not available
 
    0.834
yfbM
annotation not available
  
     0.739
yfaL
Putative autotransporter adhesin yfal; Probably an autotransporter
  
    0.722
ymfA
annotation not available
  
     0.714
yghD
Putative membrane-anchored secretion pathway m-type protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of folded proteins across the outer membrane
  
     0.712
yehI
DUF4132 domain-containing protein YehI; To E.coli molybdate metabolism regulator (MolR)
  
     0.706
nohD
Terminase small subunit / prophage dna-packing protein; DNA-packaging protein NU1 homolog; Bacteriophage DNA packaging protein
  
     0.696
yhiM
Inner membrane protein with a role in acid resistance; Inner membrane protein YhiM; Pseudogene, DUF4049 family protein
  
     0.694
nfrA
Bacteriophage n4 receptor, outer membrane protein; (Microbial infection) Allows N4 phage attachment by binding to the viral non-contractile sheath protein
  
     0.684
mdtO
Membrane translocase (mdr) of mdtnop efflux pump, pet family; Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride
  
     0.684
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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