Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bacA | yaiW | b3057 | b0378 | Undecaprenyl pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin | annotation not available | 0.600 |
sbmA | yaiW | b0377 | b0378 | Peptide antibiotic/peptide nucleic acid transporter; Uptake of antimicrobial peptides. Required for the transport of microcin B17 (MccB17), microcin 25 (Mcc25) and proline-rich antimicrobial peptides into the cell | annotation not available | 0.951 |
yaiW | bacA | b0378 | b3057 | annotation not available | Undecaprenyl pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin | 0.600 |
yaiW | sbmA | b0378 | b0377 | annotation not available | Peptide antibiotic/peptide nucleic acid transporter; Uptake of antimicrobial peptides. Required for the transport of microcin B17 (MccB17), microcin 25 (Mcc25) and proline-rich antimicrobial peptides into the cell | 0.951 |
yaiW | ydhK | b0378 | b1645 | annotation not available | annotation not available | 0.731 |
yaiW | yeaY | b0378 | b1806 | annotation not available | Slp family lipoprotein, rpoe-regulated; Uncharacterized lipoprotein YeaY; Putative outer membrane protein | 0.579 |
yaiW | yfeK | b0378 | b2419 | annotation not available | annotation not available | 0.678 |
yaiW | yfeS | b0378 | b2420 | annotation not available | annotation not available | 0.734 |
yaiW | yfeY | b0378 | b2432 | annotation not available | annotation not available | 0.627 |
yaiW | yidR | b0378 | b3689 | annotation not available | annotation not available | 0.607 |
yaiW | yiiS | b0378 | b3922 | annotation not available | DUF406 domain-containing protein YiiS; Belongs to the UPF0381 family | 0.603 |
yaiW | yjbG | b0378 | b4028 | annotation not available | Extracellular polysaccharide export oma protein; To E.coli YmcB | 0.602 |
ydhK | yaiW | b1645 | b0378 | annotation not available | annotation not available | 0.731 |
ydhK | yfeK | b1645 | b2419 | annotation not available | annotation not available | 0.737 |
ydhK | yfeS | b1645 | b2420 | annotation not available | annotation not available | 0.788 |
ydhK | yidR | b1645 | b3689 | annotation not available | annotation not available | 0.678 |
yeaY | yaiW | b1806 | b0378 | Slp family lipoprotein, rpoe-regulated; Uncharacterized lipoprotein YeaY; Putative outer membrane protein | annotation not available | 0.579 |
yeaY | yfeY | b1806 | b2432 | Slp family lipoprotein, rpoe-regulated; Uncharacterized lipoprotein YeaY; Putative outer membrane protein | annotation not available | 0.652 |
yeaY | yiiS | b1806 | b3922 | Slp family lipoprotein, rpoe-regulated; Uncharacterized lipoprotein YeaY; Putative outer membrane protein | DUF406 domain-containing protein YiiS; Belongs to the UPF0381 family | 0.474 |
yfeK | yaiW | b2419 | b0378 | annotation not available | annotation not available | 0.678 |
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