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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yaiWannotation not available (364 aa)    
Predicted Functional Partners:
sbmA
Peptide antibiotic/peptide nucleic acid transporter; Uptake of antimicrobial peptides. Required for the transport of microcin B17 (MccB17), microcin 25 (Mcc25) and proline-rich antimicrobial peptides into the cell
 
    0.951
yfeS
annotation not available
      
 0.734
ydhK
annotation not available
      
 0.731
yfeK
annotation not available
      
 0.678
yfeY
annotation not available
   
  
 0.627
yidR
annotation not available
      
 0.607
yiiS
DUF406 domain-containing protein YiiS; Belongs to the UPF0381 family
      
 0.603
yjbG
Extracellular polysaccharide export oma protein; To E.coli YmcB
      
 0.602
bacA
Undecaprenyl pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
      
 0.600
yeaY
Slp family lipoprotein, rpoe-regulated; Uncharacterized lipoprotein YeaY; Putative outer membrane protein
  
   
 0.579
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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