node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aroL | yaiA | b0388 | b0389 | Shikimate kinase ii; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate | annotation not available | 0.695 |
cho | rcsA | b1741 | b1951 | Incises the DNA at the 3' side of a lesion during nucleotide excision repair. Incises the DNA farther away from the lesion than UvrC. Not able to incise the 5' site of a lesion. In vitro, the incision activity of Cho is UvrA and UvrB dependent. When a lesion remains because UvrC is not able to induce the 3' incision, Cho incises the DNA. Then UvrC makes the 5' incision. The combined action of Cho and UvrC broadens the substrate range of nucleotide excision repair | Luxr family transcriptional regulator, capsular biosynthesis positive transcription factor; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds, with RcsB, to the RcsAB box to regulate expression of genes involved in colanic acid capsule synthesis | 0.521 |
cho | yaiA | b1741 | b0389 | Incises the DNA at the 3' side of a lesion during nucleotide excision repair. Incises the DNA farther away from the lesion than UvrC. Not able to incise the 5' site of a lesion. In vitro, the incision activity of Cho is UvrA and UvrB dependent. When a lesion remains because UvrC is not able to induce the 3' incision, Cho incises the DNA. Then UvrC makes the 5' incision. The combined action of Cho and UvrC broadens the substrate range of nucleotide excision repair | annotation not available | 0.700 |
cho | ybgS | b1741 | b0753 | Incises the DNA at the 3' side of a lesion during nucleotide excision repair. Incises the DNA farther away from the lesion than UvrC. Not able to incise the 5' site of a lesion. In vitro, the incision activity of Cho is UvrA and UvrB dependent. When a lesion remains because UvrC is not able to induce the 3' incision, Cho incises the DNA. Then UvrC makes the 5' incision. The combined action of Cho and UvrC broadens the substrate range of nucleotide excision repair | Putative periplasmic protein; Uncharacterized protein YbgS; Putative homeobox protein | 0.557 |
cho | yccJ | b1741 | b1003 | Incises the DNA at the 3' side of a lesion during nucleotide excision repair. Incises the DNA farther away from the lesion than UvrC. Not able to incise the 5' site of a lesion. In vitro, the incision activity of Cho is UvrA and UvrB dependent. When a lesion remains because UvrC is not able to induce the 3' incision, Cho incises the DNA. Then UvrC makes the 5' incision. The combined action of Cho and UvrC broadens the substrate range of nucleotide excision repair | annotation not available | 0.456 |
cho | ychO | b1741 | b1220 | Incises the DNA at the 3' side of a lesion during nucleotide excision repair. Incises the DNA farther away from the lesion than UvrC. Not able to incise the 5' site of a lesion. In vitro, the incision activity of Cho is UvrA and UvrB dependent. When a lesion remains because UvrC is not able to induce the 3' incision, Cho incises the DNA. Then UvrC makes the 5' incision. The combined action of Cho and UvrC broadens the substrate range of nucleotide excision repair | Putative invasin ycho; Uncharacterized protein YchO; Conserved protein, invasin-like | 0.601 |
rcsA | cho | b1951 | b1741 | Luxr family transcriptional regulator, capsular biosynthesis positive transcription factor; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds, with RcsB, to the RcsAB box to regulate expression of genes involved in colanic acid capsule synthesis | Incises the DNA at the 3' side of a lesion during nucleotide excision repair. Incises the DNA farther away from the lesion than UvrC. Not able to incise the 5' site of a lesion. In vitro, the incision activity of Cho is UvrA and UvrB dependent. When a lesion remains because UvrC is not able to induce the 3' incision, Cho incises the DNA. Then UvrC makes the 5' incision. The combined action of Cho and UvrC broadens the substrate range of nucleotide excision repair | 0.521 |
rcsA | yaiA | b1951 | b0389 | Luxr family transcriptional regulator, capsular biosynthesis positive transcription factor; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds, with RcsB, to the RcsAB box to regulate expression of genes involved in colanic acid capsule synthesis | annotation not available | 0.711 |
rcsA | ybgS | b1951 | b0753 | Luxr family transcriptional regulator, capsular biosynthesis positive transcription factor; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds, with RcsB, to the RcsAB box to regulate expression of genes involved in colanic acid capsule synthesis | Putative periplasmic protein; Uncharacterized protein YbgS; Putative homeobox protein | 0.642 |
rcsA | yccJ | b1951 | b1003 | Luxr family transcriptional regulator, capsular biosynthesis positive transcription factor; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds, with RcsB, to the RcsAB box to regulate expression of genes involved in colanic acid capsule synthesis | annotation not available | 0.427 |
rcsA | ychO | b1951 | b1220 | Luxr family transcriptional regulator, capsular biosynthesis positive transcription factor; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds, with RcsB, to the RcsAB box to regulate expression of genes involved in colanic acid capsule synthesis | Putative invasin ycho; Uncharacterized protein YchO; Conserved protein, invasin-like | 0.531 |
yaeH | yaiA | b0163 | b0389 | DUF3461 domain-containing protein YaeH; Belongs to the UPF0325 family | annotation not available | 0.692 |
yaeH | ydcH | b0163 | b1426 | DUF3461 domain-containing protein YaeH; Belongs to the UPF0325 family | annotation not available | 0.887 |
yaiA | aroL | b0389 | b0388 | annotation not available | Shikimate kinase ii; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate | 0.695 |
yaiA | cho | b0389 | b1741 | annotation not available | Incises the DNA at the 3' side of a lesion during nucleotide excision repair. Incises the DNA farther away from the lesion than UvrC. Not able to incise the 5' site of a lesion. In vitro, the incision activity of Cho is UvrA and UvrB dependent. When a lesion remains because UvrC is not able to induce the 3' incision, Cho incises the DNA. Then UvrC makes the 5' incision. The combined action of Cho and UvrC broadens the substrate range of nucleotide excision repair | 0.700 |
yaiA | rcsA | b0389 | b1951 | annotation not available | Luxr family transcriptional regulator, capsular biosynthesis positive transcription factor; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds, with RcsB, to the RcsAB box to regulate expression of genes involved in colanic acid capsule synthesis | 0.711 |
yaiA | yaeH | b0389 | b0163 | annotation not available | DUF3461 domain-containing protein YaeH; Belongs to the UPF0325 family | 0.692 |
yaiA | ybgS | b0389 | b0753 | annotation not available | Putative periplasmic protein; Uncharacterized protein YbgS; Putative homeobox protein | 0.770 |
yaiA | yccJ | b0389 | b1003 | annotation not available | annotation not available | 0.779 |
yaiA | ychO | b0389 | b1220 | annotation not available | Putative invasin ycho; Uncharacterized protein YchO; Conserved protein, invasin-like | 0.662 |