Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
tauC | yaiI | b0367 | b0387 | Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane | annotation not available | 0.601 |
tauC | yaiZ | b0367 | b0380 | Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane | annotation not available | 0.877 |
tauC | yajI | b0367 | b0412 | Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane | annotation not available | 0.822 |
tsx | yajI | b0411 | b0412 | Nucleoside channel, receptor of phage t6 and colicin k; Functions as substrate-specific channel for nucleosides and deoxynucleosides . Has a greater affinity for deoxynucleosides than for nucleosides, and does not transport free bases . In addition, constitutes the receptor for colicin K and phage T6 | annotation not available | 0.759 |
tsx | yieE | b0411 | b3712 | Nucleoside channel, receptor of phage t6 and colicin k; Functions as substrate-specific channel for nucleosides and deoxynucleosides . Has a greater affinity for deoxynucleosides than for nucleosides, and does not transport free bases . In addition, constitutes the receptor for colicin K and phage T6 | annotation not available | 0.475 |
yaiI | tauC | b0387 | b0367 | annotation not available | Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane | 0.601 |
yaiI | yajI | b0387 | b0412 | annotation not available | annotation not available | 0.829 |
yaiY | yaiZ | b0379 | b0380 | annotation not available | annotation not available | 0.876 |
yaiY | yajI | b0379 | b0412 | annotation not available | annotation not available | 0.759 |
yaiY | ybhQ | b0379 | b0791 | annotation not available | annotation not available | 0.748 |
yaiY | yieE | b0379 | b3712 | annotation not available | annotation not available | 0.501 |
yaiY | ysaB | b0379 | b4553 | annotation not available | annotation not available | 0.761 |
yaiZ | tauC | b0380 | b0367 | annotation not available | Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane | 0.877 |
yaiZ | yaiY | b0380 | b0379 | annotation not available | annotation not available | 0.876 |
yaiZ | yajI | b0380 | b0412 | annotation not available | annotation not available | 0.726 |
yaiZ | ybhQ | b0380 | b0791 | annotation not available | annotation not available | 0.793 |
yaiZ | yieE | b0380 | b3712 | annotation not available | annotation not available | 0.454 |
yaiZ | ysaB | b0380 | b4553 | annotation not available | annotation not available | 0.754 |
yajI | tauC | b0412 | b0367 | annotation not available | Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane | 0.822 |
yajI | tsx | b0412 | b0411 | annotation not available | Nucleoside channel, receptor of phage t6 and colicin k; Functions as substrate-specific channel for nucleosides and deoxynucleosides . Has a greater affinity for deoxynucleosides than for nucleosides, and does not transport free bases . In addition, constitutes the receptor for colicin K and phage T6 | 0.759 |
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