STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yajIannotation not available (179 aa)    
Predicted Functional Partners:
yaiI
annotation not available
      
 0.829
tauC
Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane
      
 0.822
ybjM
annotation not available
  
   
 0.801
yehR
Uncharacterized lipoprotein YehR; Pseudogene
  
   
 0.775
ysaB
annotation not available
  
  
 0.767
yieE
annotation not available
  
    0.765
yaiY
annotation not available
  
    0.759
tsx
Functions as substrate-specific channel for nucleosides and deoxynucleosides . Has a greater affinity for deoxynucleosides than for nucleosides, and does not transport free bases . In addition, constitutes the receptor for colicin K and phage T6 .
 
 
 
 0.759
yaiZ
annotation not available
  
     0.726
ybhQ
annotation not available
  
     0.717
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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