STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhsDRhs elements have a nonessential function. They may play an important role in the natural ecology of the cell (1426 aa)    
Predicted Functional Partners:
ybbP
Uncharacterized ABC transporter permease YbbP; Putative oxidoreductase
      
 0.877
tauC
Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane
      
 0.790
ybbC
annotation not available
  
    0.758
insL1
IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related
  
     0.742
b0582
IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related
  
     0.742
b2394
annotation not available
  
     0.742
yibA
annotation not available
 
     0.726
ypjA
Uncharacterized outer membrane protein YpjA; Putative ATP-binding component of a transport system
  
 
   0.708
frvR
Could be involved in the regulation of the transcription of the FRV operon
  
     0.705
sfmH
Part of the sfmACDHF fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches. Increases adhesion to eukaryotic T24 bladder epithelial cells in the absence of fim genes
  
     0.688
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
Server load: low (4%) [HD]