node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dbpA | nohD | b1343 | b0560 | ATP-dependent RNA helicase, specific for 23S rRNA; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. Requires a single-stranded RNA loading site on the 3' side of the substrate helix. | DLP12 prophage; Bacteriophage DNA packaging protein. | 0.470 |
helD | nohD | b0962 | b0560 | DNA helicase IV; Helicase IV catalyzes the unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand in a reaction that is dependent upon the hydrolysis of ATP. | DLP12 prophage; Bacteriophage DNA packaging protein. | 0.459 |
helD | yccF | b0962 | b0961 | DNA helicase IV; Helicase IV catalyzes the unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand in a reaction that is dependent upon the hydrolysis of ATP. | DUF307 family inner membrane protein. | 0.769 |
helD | ynfO | b0962 | b4533 | DNA helicase IV; Helicase IV catalyzes the unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand in a reaction that is dependent upon the hydrolysis of ATP. | Uncharacterized protein YnfO; Pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin. | 0.488 |
nohD | dbpA | b0560 | b1343 | DLP12 prophage; Bacteriophage DNA packaging protein. | ATP-dependent RNA helicase, specific for 23S rRNA; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. Requires a single-stranded RNA loading site on the 3' side of the substrate helix. | 0.470 |
nohD | helD | b0560 | b0962 | DLP12 prophage; Bacteriophage DNA packaging protein. | DNA helicase IV; Helicase IV catalyzes the unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand in a reaction that is dependent upon the hydrolysis of ATP. | 0.459 |
nohD | rclA | b0560 | b0304 | DLP12 prophage; Bacteriophage DNA packaging protein. | Reactive chlorine stress species (RCS) resistance protein; Probably involved in reactive chlorine species (RCS) stress resistance. | 0.517 |
nohD | tdcD | b0560 | b3115 | DLP12 prophage; Bacteriophage DNA packaging protein. | Propionate kinase/acetate kinase C, anaerobic; Catalyzes the conversion of propionyl phosphate and ADP to propionate and ATP. It can also use acetyl phosphate as phosphate group acceptor; Belongs to the acetokinase family. TdcD subfamily. | 0.471 |
nohD | yccF | b0560 | b0961 | DLP12 prophage; Bacteriophage DNA packaging protein. | DUF307 family inner membrane protein. | 0.786 |
nohD | yecD | b0560 | b1867 | DLP12 prophage; Bacteriophage DNA packaging protein. | Isochorismatase family protein; Belongs to the isochorismatase family. | 0.530 |
nohD | ynfO | b0560 | b4533 | DLP12 prophage; Bacteriophage DNA packaging protein. | Uncharacterized protein YnfO; Pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin. | 0.753 |
rclA | nohD | b0304 | b0560 | Reactive chlorine stress species (RCS) resistance protein; Probably involved in reactive chlorine species (RCS) stress resistance. | DLP12 prophage; Bacteriophage DNA packaging protein. | 0.517 |
tdcD | nohD | b3115 | b0560 | Propionate kinase/acetate kinase C, anaerobic; Catalyzes the conversion of propionyl phosphate and ADP to propionate and ATP. It can also use acetyl phosphate as phosphate group acceptor; Belongs to the acetokinase family. TdcD subfamily. | DLP12 prophage; Bacteriophage DNA packaging protein. | 0.471 |
yccF | helD | b0961 | b0962 | DUF307 family inner membrane protein. | DNA helicase IV; Helicase IV catalyzes the unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand in a reaction that is dependent upon the hydrolysis of ATP. | 0.769 |
yccF | nohD | b0961 | b0560 | DUF307 family inner membrane protein. | DLP12 prophage; Bacteriophage DNA packaging protein. | 0.786 |
yccF | ynfO | b0961 | b4533 | DUF307 family inner membrane protein. | Uncharacterized protein YnfO; Pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin. | 0.756 |
yecD | nohD | b1867 | b0560 | Isochorismatase family protein; Belongs to the isochorismatase family. | DLP12 prophage; Bacteriophage DNA packaging protein. | 0.530 |
ynfO | helD | b4533 | b0962 | Uncharacterized protein YnfO; Pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin. | DNA helicase IV; Helicase IV catalyzes the unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand in a reaction that is dependent upon the hydrolysis of ATP. | 0.488 |
ynfO | nohD | b4533 | b0560 | Uncharacterized protein YnfO; Pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin. | DLP12 prophage; Bacteriophage DNA packaging protein. | 0.753 |
ynfO | yccF | b4533 | b0961 | Uncharacterized protein YnfO; Pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin. | DUF307 family inner membrane protein. | 0.756 |