STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybeRannotation not available (235 aa)    
Predicted Functional Partners:
djlB
Uncharacterized J domain-containing protein DjlB; Putative enzyme of polynucleotide modification; Protein involved in protein folding
 
    0.967
ypjA
Uncharacterized outer membrane protein YpjA; Putative ATP-binding component of a transport system
  
   
 0.839
djlC
Uncharacterized J domain-containing protein DjlC; Factor; Chaperones
  
    0.778
elfG
Uncharacterized fimbrial-like protein ElfG; Part of the elfADCG-ycbUVF fimbrial operon, which promotes adhesion of bacteria to different abiotic surfaces
  
     0.764
ycbU
Uncharacterized fimbrial-like protein YcbU; Part of the elfADCG-ycbUVF fimbrial operon, which promotes adhesion of bacteria to different abiotic surfaces
  
     0.747
ycgV
Uncharacterized protein YcgV; Putative adhesion and penetration protein
  
     0.739
yraK
Uncharacterized fimbrial-like protein YraK; Part of the yraHIJK fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches. Increases adhesion to eukaryotic T24 bladder epithelial cells in the absence of fim operon
  
     0.734
ybeQ
annotation not available
 
     0.729
yehP
annotation not available
  
   
 0.721
ycbV
Uncharacterized fimbrial-like protein YcbV; Part of the elfADCG-ycbUVF fimbrial operon, which promotes adhesion of bacteria to different abiotic surfaces
  
     0.714
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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