STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybgOPutative fimbrial protein; May be involved in a fimbrial system chaperoned by YbgP and exported by YbgQ. (353 aa)    
Predicted Functional Partners:
ybgP
Putative periplasmic pilin chaperone; Could be required for the biogenesis of the putative YbgD fimbria; Belongs to the periplasmic pilus chaperone family.
 
    0.852
ybgQ
Putative outer membrane protein; Could be involved in the export and assembly of the putative YbgD fimbrial subunit across the outer membrane; Belongs to the fimbrial export usher family.
  
  
 0.816
ybgS
Putative homeobox protein.
      
 0.782
elfA
Laminin-binding fimbrin subunit; Part of the elfADCG-ycbUVF fimbrial operon, which promotes adhesion of bacteria to different abiotic surfaces. ElfA is the major fimbrial subunit produced by this operon.
     
 0.643
ybfC
Uncharacterized protein YbfC; Pseudogene, Rhs family.
   
  
 0.626
mngA
Fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This system is involved in mannosyl- D-glycerate transport. Also involved in thermoinduction of ompC.
      
 0.600
ybgD
Putative fimbrial-like protein; Belongs to the fimbrial protein family.
  
    0.582
abrB
Regulator of aidB expression; Seems to be involved in the regulation of AidB; Belongs to the AbrB family.
  
    0.492
ydaQ
Rac prophage; Putative lambdoid prophage Rac excisionase.
   
  
 0.485
yjbJ
Stress-induced protein, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
   
  
 0.477
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.