node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dcuD | yaiS | b3227 | b0364 | C4-dicarboxylate transporter, DcuC family; May have a role in the transport of dicarboxylates from the periplasm across the inner membrane. Seems not to be essential for growth. It is likely to be a cryptic gene, as no or low expression has been found under a number of growth conditions and when tested with a large number of potential substrates | Uncharacterized deacetylase YaiS; Putative enzyme; Not classified; Belongs to the PIGL family | 0.561 |
dcuD | ybhK | b3227 | b0780 | C4-dicarboxylate transporter, DcuC family; May have a role in the transport of dicarboxylates from the periplasm across the inner membrane. Seems not to be essential for growth. It is likely to be a cryptic gene, as no or low expression has been found under a number of growth conditions and when tested with a large number of potential substrates | Putative cofd superfamily transferase; Required for morphogenesis under gluconeogenic growth conditions | 0.499 |
ftsK | topA | b0890 | b1274 | Dna translocase at septal ring sorting daughter chromsomes; Essential cell division protein that coordinates cell division and chromosome segregation. The N-terminus is involved in assembly of the cell-division machinery. The C-terminus functions as a DNA motor that moves dsDNA in an ATP-dependent manner towards the dif recombination site, which is located within the replication terminus region. Translocation stops specifically at Xer-dif sites, where FtsK interacts with the Xer recombinase, allowing activation of chromosome unlinking by recombination. FtsK orienting polar sequences (K [...] | Dna topoisomerase i, omega subunit; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus re [...] | 0.490 |
ftsK | ybhK | b0890 | b0780 | Dna translocase at septal ring sorting daughter chromsomes; Essential cell division protein that coordinates cell division and chromosome segregation. The N-terminus is involved in assembly of the cell-division machinery. The C-terminus functions as a DNA motor that moves dsDNA in an ATP-dependent manner towards the dif recombination site, which is located within the replication terminus region. Translocation stops specifically at Xer-dif sites, where FtsK interacts with the Xer recombinase, allowing activation of chromosome unlinking by recombination. FtsK orienting polar sequences (K [...] | Putative cofd superfamily transferase; Required for morphogenesis under gluconeogenic growth conditions | 0.568 |
htrE | hyaD | b0139 | b0975 | Putative outer membrane usher protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches. Probably involved in the export and assembly of fimbrial subunits across the outer membrane | Putative hydrogenase 1 maturation protease hyad; Protease involved in the C-terminal processing of HyaB, the large subunit of hydrogenase 1 | 0.499 |
htrE | leuS | b0139 | b0642 | Putative outer membrane usher protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches. Probably involved in the export and assembly of fimbrial subunits across the outer membrane | Leucyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family | 0.692 |
htrE | ligA | b0139 | b2411 | Putative outer membrane usher protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches. Probably involved in the export and assembly of fimbrial subunits across the outer membrane | Dna ligase, nad(+)-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA | 0.499 |
htrE | ybhK | b0139 | b0780 | Putative outer membrane usher protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches. Probably involved in the export and assembly of fimbrial subunits across the outer membrane | Putative cofd superfamily transferase; Required for morphogenesis under gluconeogenic growth conditions | 0.499 |
hyaD | htrE | b0975 | b0139 | Putative hydrogenase 1 maturation protease hyad; Protease involved in the C-terminal processing of HyaB, the large subunit of hydrogenase 1 | Putative outer membrane usher protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches. Probably involved in the export and assembly of fimbrial subunits across the outer membrane | 0.499 |
hyaD | ileS | b0975 | b0026 | Putative hydrogenase 1 maturation protease hyad; Protease involved in the C-terminal processing of HyaB, the large subunit of hydrogenase 1 | Isoleucyl-trna synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) | 0.692 |
hyaD | leuS | b0975 | b0642 | Putative hydrogenase 1 maturation protease hyad; Protease involved in the C-terminal processing of HyaB, the large subunit of hydrogenase 1 | Leucyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family | 0.499 |
hyaD | ligA | b0975 | b2411 | Putative hydrogenase 1 maturation protease hyad; Protease involved in the C-terminal processing of HyaB, the large subunit of hydrogenase 1 | Dna ligase, nad(+)-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA | 0.506 |
hyaD | topA | b0975 | b1274 | Putative hydrogenase 1 maturation protease hyad; Protease involved in the C-terminal processing of HyaB, the large subunit of hydrogenase 1 | Dna topoisomerase i, omega subunit; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus re [...] | 0.535 |
hyaD | ybhK | b0975 | b0780 | Putative hydrogenase 1 maturation protease hyad; Protease involved in the C-terminal processing of HyaB, the large subunit of hydrogenase 1 | Putative cofd superfamily transferase; Required for morphogenesis under gluconeogenic growth conditions | 0.499 |
ileS | hyaD | b0026 | b0975 | Isoleucyl-trna synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) | Putative hydrogenase 1 maturation protease hyad; Protease involved in the C-terminal processing of HyaB, the large subunit of hydrogenase 1 | 0.692 |
ileS | leuS | b0026 | b0642 | Isoleucyl-trna synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) | Leucyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family | 0.984 |
ileS | ligA | b0026 | b2411 | Isoleucyl-trna synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) | Dna ligase, nad(+)-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA | 0.697 |
ileS | ybhK | b0026 | b0780 | Isoleucyl-trna synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) | Putative cofd superfamily transferase; Required for morphogenesis under gluconeogenic growth conditions | 0.499 |
leuS | htrE | b0642 | b0139 | Leucyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family | Putative outer membrane usher protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches. Probably involved in the export and assembly of fimbrial subunits across the outer membrane | 0.692 |
leuS | hyaD | b0642 | b0975 | Leucyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family | Putative hydrogenase 1 maturation protease hyad; Protease involved in the C-terminal processing of HyaB, the large subunit of hydrogenase 1 | 0.499 |