STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybiJannotation not available (86 aa)    
Predicted Functional Partners:
yhaK
Does not have quercetin 2,3-dioxygenase activity.
  
   
 0.913
yjfY
annotation not available
  
   
 0.904
yqjF
annotation not available
  
   
 0.890
yhhW
Has quercetin 2,3-dioxygenase activity in vitro. Its physiological role is unknown; however, may provide a mechanism that would avoid inhibition of key cellular proteins, such as DNA gyrase, by quercetin
      
 0.876
ydgH
To E.coli YjfY
  
   
 0.861
rclB
Probably involved in reactive chlorine species (RCS) stress resistance
   
  
 0.840
yjfN
annotation not available
  
   
 0.820
yhaJ
Positive regulator, may be partially responsible for expression of neighboring gene dlsT (yhaO) (By similarity).
  
   
 0.794
yejG
annotation not available
  
    0.772
yebY
annotation not available
  
     0.758
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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