STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cspGHomolog of Salmonella cold shock protein; Protein involved in response to temperature stimulus (70 aa)    
Predicted Functional Partners:
cspB
Cold shock-like protein CspB; Phenotype; Adaptations, atypical conditions; Phage or Prophage Related
  
 
0.924
cspA
Binds to and stimulates the transcription of the CCAAT- containing, cold-shock-inducible promoters of the H-NS and GyrA proteins. Binds also to the inverted repeat 5'-ATTGG-3'.
  
 
0.771
ymcE
Uncharacterized protein YmcE; Suppresses fabA and ts growth mutation
     
 0.689
cspH
Cold shock-like protein; Protein involved in response to temperature stimulus
 
  
0.633
gnsA
Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation
     
 0.629
pgsA
This protein catalyzes the committed step to the synthesis of the acidic phospholipids
      
 0.516
hslJ
Heat shock protein hslJ; Protein involved in response to temperature stimulus
      
 0.438
speG
Involved in the protection against polyamine toxicity by regulating their concentration . Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to the primary amino groups of spermidine to yield N(1)- and N(8)-acetylspermidine . It can also use polyamines such as spermine, but not putrescine . ECO:0000269|PubMed:6297970, ECO:0000269|PubMed:7052085,
   
  
 0.432
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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