Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| elaB | msyB | b2266 | b1051 | Putative membrane-anchored duf883 family ribosome-binding protein; Belongs to the ElaB/YgaM/YqjD family | Acidic protein that suppresses heat sensitivity of a secy mutant; Could participate in the normal pathway of protein export | 0.787 |
| elaB | osmE | b2266 | b1739 | Putative membrane-anchored duf883 family ribosome-binding protein; Belongs to the ElaB/YgaM/YqjD family | Osmotically-inducible putative lipoprotein OsmE; Activator of ntrL gene; Protein involved in transcription activator activity, transcription and response to osmotic stress | 0.806 |
| elaB | wrbA | b2266 | b1004 | Putative membrane-anchored duf883 family ribosome-binding protein; Belongs to the ElaB/YgaM/YqjD family | Nad(p)h dehydrogenase (quinone); It seems to function in response to environmental stress when various electron transfer chains are affected or when the environment is highly oxidizing. It reduces quinones to the hydroquinone state to prevent interaction of the semiquinone with O2 and production of superoxide. It prefers NADH over NADPH | 0.805 |
| elaB | ycaC | b2266 | b0897 | Putative membrane-anchored duf883 family ribosome-binding protein; Belongs to the ElaB/YgaM/YqjD family | Putative isochorismatase family hydrolase; Probable hydrolase YcaC; Protein involved in cellular amino acid catabolic process | 0.927 |
| elaB | yccJ | b2266 | b1003 | Putative membrane-anchored duf883 family ribosome-binding protein; Belongs to the ElaB/YgaM/YqjD family | annotation not available | 0.846 |
| elaB | ydiZ | b2266 | b1724 | Putative membrane-anchored duf883 family ribosome-binding protein; Belongs to the ElaB/YgaM/YqjD family | annotation not available | 0.791 |
| elaB | ygaM | b2266 | b2672 | Putative membrane-anchored duf883 family ribosome-binding protein; Belongs to the ElaB/YgaM/YqjD family | annotation not available | 0.919 |
| elaB | yiaG | b2266 | b3555 | Putative membrane-anchored duf883 family ribosome-binding protein; Belongs to the ElaB/YgaM/YqjD family | HTH_CROC1 family putative transcriptional regulator; Uncharacterized HTH-type transcriptional regulator YiaG; Protein involved in regulation of transcription, DNA-dependent | 0.860 |
| elaB | yqjD | b2266 | b3098 | Putative membrane-anchored duf883 family ribosome-binding protein; Belongs to the ElaB/YgaM/YqjD family | Ribosome- and membrane-associated duf883 domain-containing protein yqjd; Upon overexpression inhibits growth | 0.900 |
| msyB | elaB | b1051 | b2266 | Acidic protein that suppresses heat sensitivity of a secy mutant; Could participate in the normal pathway of protein export | Putative membrane-anchored duf883 family ribosome-binding protein; Belongs to the ElaB/YgaM/YqjD family | 0.787 |
| msyB | osmE | b1051 | b1739 | Acidic protein that suppresses heat sensitivity of a secy mutant; Could participate in the normal pathway of protein export | Osmotically-inducible putative lipoprotein OsmE; Activator of ntrL gene; Protein involved in transcription activator activity, transcription and response to osmotic stress | 0.857 |
| msyB | wrbA | b1051 | b1004 | Acidic protein that suppresses heat sensitivity of a secy mutant; Could participate in the normal pathway of protein export | Nad(p)h dehydrogenase (quinone); It seems to function in response to environmental stress when various electron transfer chains are affected or when the environment is highly oxidizing. It reduces quinones to the hydroquinone state to prevent interaction of the semiquinone with O2 and production of superoxide. It prefers NADH over NADPH | 0.793 |
| msyB | ycaC | b1051 | b0897 | Acidic protein that suppresses heat sensitivity of a secy mutant; Could participate in the normal pathway of protein export | Putative isochorismatase family hydrolase; Probable hydrolase YcaC; Protein involved in cellular amino acid catabolic process | 0.844 |
| msyB | yccJ | b1051 | b1003 | Acidic protein that suppresses heat sensitivity of a secy mutant; Could participate in the normal pathway of protein export | annotation not available | 0.886 |
| msyB | ydiZ | b1051 | b1724 | Acidic protein that suppresses heat sensitivity of a secy mutant; Could participate in the normal pathway of protein export | annotation not available | 0.863 |
| msyB | ygaM | b1051 | b2672 | Acidic protein that suppresses heat sensitivity of a secy mutant; Could participate in the normal pathway of protein export | annotation not available | 0.664 |
| msyB | yiaG | b1051 | b3555 | Acidic protein that suppresses heat sensitivity of a secy mutant; Could participate in the normal pathway of protein export | HTH_CROC1 family putative transcriptional regulator; Uncharacterized HTH-type transcriptional regulator YiaG; Protein involved in regulation of transcription, DNA-dependent | 0.884 |
| msyB | yqjD | b1051 | b3098 | Acidic protein that suppresses heat sensitivity of a secy mutant; Could participate in the normal pathway of protein export | Ribosome- and membrane-associated duf883 domain-containing protein yqjd; Upon overexpression inhibits growth | 0.773 |
| osmE | elaB | b1739 | b2266 | Osmotically-inducible putative lipoprotein OsmE; Activator of ntrL gene; Protein involved in transcription activator activity, transcription and response to osmotic stress | Putative membrane-anchored duf883 family ribosome-binding protein; Belongs to the ElaB/YgaM/YqjD family | 0.806 |
| osmE | msyB | b1739 | b1051 | Osmotically-inducible putative lipoprotein OsmE; Activator of ntrL gene; Protein involved in transcription activator activity, transcription and response to osmotic stress | Acidic protein that suppresses heat sensitivity of a secy mutant; Could participate in the normal pathway of protein export | 0.857 |
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