Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
alx | yceI | b3088 | b1056 | Putative membrane-bound redox modulator; Has been proposed to be a redox modulator. | Periplasmic high pH-inducible lipid-binding protein. | 0.505 |
gpmA | yceI | b0755 | b1056 | Phosphoglyceromutase 1; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | Periplasmic high pH-inducible lipid-binding protein. | 0.518 |
solA | yceI | b1059 | b1056 | N-methyltryptophan oxidase, FAD-binding; Catalyzes the oxidative demethylation of N-methyl-L- tryptophan. Can also use other N-methyl amino acids, including sarcosine, which, however, is a poor substrate. | Periplasmic high pH-inducible lipid-binding protein. | 0.401 |
solA | yceJ | b1059 | b1057 | N-methyltryptophan oxidase, FAD-binding; Catalyzes the oxidative demethylation of N-methyl-L- tryptophan. Can also use other N-methyl amino acids, including sarcosine, which, however, is a poor substrate. | Putative cytochrome b561; Protein involved in cytochrome complex assembly; Belongs to the cytochrome b561 family. | 0.400 |
solA | yceO | b1059 | b1058 | N-methyltryptophan oxidase, FAD-binding; Catalyzes the oxidative demethylation of N-methyl-L- tryptophan. Can also use other N-methyl amino acids, including sarcosine, which, however, is a poor substrate. | Uncharacterized protein. | 0.718 |
yceI | alx | b1056 | b3088 | Periplasmic high pH-inducible lipid-binding protein. | Putative membrane-bound redox modulator; Has been proposed to be a redox modulator. | 0.505 |
yceI | gpmA | b1056 | b0755 | Periplasmic high pH-inducible lipid-binding protein. | Phosphoglyceromutase 1; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | 0.518 |
yceI | solA | b1056 | b1059 | Periplasmic high pH-inducible lipid-binding protein. | N-methyltryptophan oxidase, FAD-binding; Catalyzes the oxidative demethylation of N-methyl-L- tryptophan. Can also use other N-methyl amino acids, including sarcosine, which, however, is a poor substrate. | 0.401 |
yceI | yceJ | b1056 | b1057 | Periplasmic high pH-inducible lipid-binding protein. | Putative cytochrome b561; Protein involved in cytochrome complex assembly; Belongs to the cytochrome b561 family. | 0.986 |
yceI | yceO | b1056 | b1058 | Periplasmic high pH-inducible lipid-binding protein. | Uncharacterized protein. | 0.419 |
yceJ | solA | b1057 | b1059 | Putative cytochrome b561; Protein involved in cytochrome complex assembly; Belongs to the cytochrome b561 family. | N-methyltryptophan oxidase, FAD-binding; Catalyzes the oxidative demethylation of N-methyl-L- tryptophan. Can also use other N-methyl amino acids, including sarcosine, which, however, is a poor substrate. | 0.400 |
yceJ | yceI | b1057 | b1056 | Putative cytochrome b561; Protein involved in cytochrome complex assembly; Belongs to the cytochrome b561 family. | Periplasmic high pH-inducible lipid-binding protein. | 0.986 |
yceJ | yceO | b1057 | b1058 | Putative cytochrome b561; Protein involved in cytochrome complex assembly; Belongs to the cytochrome b561 family. | Uncharacterized protein. | 0.419 |
yceO | solA | b1058 | b1059 | Uncharacterized protein. | N-methyltryptophan oxidase, FAD-binding; Catalyzes the oxidative demethylation of N-methyl-L- tryptophan. Can also use other N-methyl amino acids, including sarcosine, which, however, is a poor substrate. | 0.718 |
yceO | yceI | b1058 | b1056 | Uncharacterized protein. | Periplasmic high pH-inducible lipid-binding protein. | 0.419 |
yceO | yceJ | b1058 | b1057 | Uncharacterized protein. | Putative cytochrome b561; Protein involved in cytochrome complex assembly; Belongs to the cytochrome b561 family. | 0.419 |