Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| hemA | kdsA | b1210 | b1215 | Glutamyl-trna reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). In the absence of NADPH, exhibits substrate esterase activity, leading to the release of glutamate from tRNA | 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Synthesis of KDO 8-P which is required for lipid A maturation and cellular growth | 0.728 |
| hemA | prfA | b1210 | b1211 | Glutamyl-trna reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). In the absence of NADPH, exhibits substrate esterase activity, leading to the release of glutamate from tRNA | Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA | 0.941 |
| hemA | prmC | b1210 | b1212 | Glutamyl-trna reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). In the absence of NADPH, exhibits substrate esterase activity, leading to the release of glutamate from tRNA | RF-1 and RF-2 N5-glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif, i.e. on 'Gln-235' in RF1 and on 'Gln- 252' in RF2 | 0.894 |
| hemA | ychA | b1210 | b1214 | Glutamyl-trna reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). In the absence of NADPH, exhibits substrate esterase activity, leading to the release of glutamate from tRNA | Transglutaminase-like/tpr repeat-containing protein; Belongs to the UPF0162 family | 0.789 |
| hemA | ychQ | b1210 | b1213 | Glutamyl-trna reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). In the absence of NADPH, exhibits substrate esterase activity, leading to the release of glutamate from tRNA | Sirb family inner membrane protein; Protein involved in regulation of transcription, DNA-dependent | 0.726 |
| kdsA | hemA | b1215 | b1210 | 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Synthesis of KDO 8-P which is required for lipid A maturation and cellular growth | Glutamyl-trna reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). In the absence of NADPH, exhibits substrate esterase activity, leading to the release of glutamate from tRNA | 0.728 |
| kdsA | prfA | b1215 | b1211 | 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Synthesis of KDO 8-P which is required for lipid A maturation and cellular growth | Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA | 0.817 |
| kdsA | prmC | b1215 | b1212 | 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Synthesis of KDO 8-P which is required for lipid A maturation and cellular growth | RF-1 and RF-2 N5-glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif, i.e. on 'Gln-235' in RF1 and on 'Gln- 252' in RF2 | 0.806 |
| kdsA | ychA | b1215 | b1214 | 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Synthesis of KDO 8-P which is required for lipid A maturation and cellular growth | Transglutaminase-like/tpr repeat-containing protein; Belongs to the UPF0162 family | 0.814 |
| kdsA | ychQ | b1215 | b1213 | 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Synthesis of KDO 8-P which is required for lipid A maturation and cellular growth | Sirb family inner membrane protein; Protein involved in regulation of transcription, DNA-dependent | 0.745 |
| prfA | hemA | b1211 | b1210 | Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA | Glutamyl-trna reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). In the absence of NADPH, exhibits substrate esterase activity, leading to the release of glutamate from tRNA | 0.941 |
| prfA | kdsA | b1211 | b1215 | Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA | 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Synthesis of KDO 8-P which is required for lipid A maturation and cellular growth | 0.817 |
| prfA | prmC | b1211 | b1212 | Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA | RF-1 and RF-2 N5-glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif, i.e. on 'Gln-235' in RF1 and on 'Gln- 252' in RF2 | 0.999 |
| prfA | ychA | b1211 | b1214 | Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA | Transglutaminase-like/tpr repeat-containing protein; Belongs to the UPF0162 family | 0.900 |
| prfA | ychQ | b1211 | b1213 | Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA | Sirb family inner membrane protein; Protein involved in regulation of transcription, DNA-dependent | 0.893 |
| prmC | hemA | b1212 | b1210 | RF-1 and RF-2 N5-glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif, i.e. on 'Gln-235' in RF1 and on 'Gln- 252' in RF2 | Glutamyl-trna reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). In the absence of NADPH, exhibits substrate esterase activity, leading to the release of glutamate from tRNA | 0.894 |
| prmC | kdsA | b1212 | b1215 | RF-1 and RF-2 N5-glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif, i.e. on 'Gln-235' in RF1 and on 'Gln- 252' in RF2 | 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Synthesis of KDO 8-P which is required for lipid A maturation and cellular growth | 0.806 |
| prmC | prfA | b1212 | b1211 | RF-1 and RF-2 N5-glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif, i.e. on 'Gln-235' in RF1 and on 'Gln- 252' in RF2 | Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA | 0.999 |
| prmC | ychA | b1212 | b1214 | RF-1 and RF-2 N5-glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif, i.e. on 'Gln-235' in RF1 and on 'Gln- 252' in RF2 | Transglutaminase-like/tpr repeat-containing protein; Belongs to the UPF0162 family | 0.888 |
| prmC | ychQ | b1212 | b1213 | RF-1 and RF-2 N5-glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif, i.e. on 'Gln-235' in RF1 and on 'Gln- 252' in RF2 | Sirb family inner membrane protein; Protein involved in regulation of transcription, DNA-dependent | 0.905 |
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