Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
chaB | ychO | b1217 | b1220 | Cation transport regulator; Might be a regulator of the sodium-potassium/proton antiporter ChaA; Belongs to the ChaB family. | Conserved protein, invasin-like. | 0.455 |
pykA | pykF | b1854 | b1676 | Pyruvate kinase II, glucose stimulated; Protein involved in glycolysis, fermentation and anaerobic respiration. | Pyruvate kinase I (formerly F), fructose stimulated; Protein involved in glycolysis, fermentation and anaerobic respiration. | 0.934 |
pykA | ychO | b1854 | b1220 | Pyruvate kinase II, glucose stimulated; Protein involved in glycolysis, fermentation and anaerobic respiration. | Conserved protein, invasin-like. | 0.525 |
pykF | pykA | b1676 | b1854 | Pyruvate kinase I (formerly F), fructose stimulated; Protein involved in glycolysis, fermentation and anaerobic respiration. | Pyruvate kinase II, glucose stimulated; Protein involved in glycolysis, fermentation and anaerobic respiration. | 0.934 |
pykF | ychO | b1676 | b1220 | Pyruvate kinase I (formerly F), fructose stimulated; Protein involved in glycolysis, fermentation and anaerobic respiration. | Conserved protein, invasin-like. | 0.525 |
ybeF | ychO | b0629 | b1220 | Putative transcriptional regulator LYSR-type; Protein involved in transcription activator activity, transcription repressor activity and transcription; Belongs to the LysR transcriptional regulatory family. | Conserved protein, invasin-like. | 0.757 |
ychN | ychO | b1219 | b1220 | Putative sulfur relay protein. | Conserved protein, invasin-like. | 0.504 |
ychO | chaB | b1220 | b1217 | Conserved protein, invasin-like. | Cation transport regulator; Might be a regulator of the sodium-potassium/proton antiporter ChaA; Belongs to the ChaB family. | 0.455 |
ychO | pykA | b1220 | b1854 | Conserved protein, invasin-like. | Pyruvate kinase II, glucose stimulated; Protein involved in glycolysis, fermentation and anaerobic respiration. | 0.525 |
ychO | pykF | b1220 | b1676 | Conserved protein, invasin-like. | Pyruvate kinase I (formerly F), fructose stimulated; Protein involved in glycolysis, fermentation and anaerobic respiration. | 0.525 |
ychO | ybeF | b1220 | b0629 | Conserved protein, invasin-like. | Putative transcriptional regulator LYSR-type; Protein involved in transcription activator activity, transcription repressor activity and transcription; Belongs to the LysR transcriptional regulatory family. | 0.757 |
ychO | ychN | b1220 | b1219 | Conserved protein, invasin-like. | Putative sulfur relay protein. | 0.504 |
ychO | ykfA | b1220 | b0253 | Conserved protein, invasin-like. | CP4-6 prophage; Putative GTP-binding protein; To E.coli YfjP and YeeP. | 0.600 |
ykfA | ychO | b0253 | b1220 | CP4-6 prophage; Putative GTP-binding protein; To E.coli YfjP and YeeP. | Conserved protein, invasin-like. | 0.600 |