Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| clsA | yciI | b1249 | b1251 | Cardiolipin synthase a/b; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol | annotation not available | 0.698 |
| elfD | yciI | b0939 | b1251 | Putative periplasmic pilin chaperone; Part of the elfADCG-ycbUVF fimbrial operon, which promotes adhesion of bacteria to different abiotic surfaces. Could be required for the biogenesis of the ElfA fimbriae | annotation not available | 0.816 |
| kch | yciI | b1250 | b1251 | Voltage-gated potassium channel; K(+)-specific ion channel. May play a role in the defense against osmotic shock | annotation not available | 0.840 |
| trpS | yciI | b3384 | b1251 | Tryptophanyl-trna synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Amino acylates tRNA(Trp) with both L- and D-tryptophan, although D-tryptophan is a poor substrate | annotation not available | 0.605 |
| ubiD | yciI | b3843 | b1251 | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis | annotation not available | 0.580 |
| ubiD | yciN | b3843 | b1273 | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis | annotation not available | 0.513 |
| ubiD | ydcY | b3843 | b1446 | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis | annotation not available | 0.520 |
| ubiD | yihD | b3843 | b3858 | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis | Uncharacterized protein; To H.influenzae HI_0845 | 0.520 |
| ubiD | yoaB | b3843 | b1809 | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis | Putative reactive intermediate deaminase; RutC family protein YoaB; Putative enzyme; Not classified; Belongs to the RutC family | 0.566 |
| ubiD | yqiC | b3843 | b3042 | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis | Required for efficient ubiquinone (coenzyme Q) biosynthesis under aerobic conditions . UbiK is probably an accessory factor of Ubi enzymes and facilitates ubiquinone biosynthesis by acting as an assembly factor, a targeting factor, or both . Dispensable for ubiquinone biosynthesis under anaerobiosis | 0.489 |
| yciI | clsA | b1251 | b1249 | annotation not available | Cardiolipin synthase a/b; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol | 0.698 |
| yciI | elfD | b1251 | b0939 | annotation not available | Putative periplasmic pilin chaperone; Part of the elfADCG-ycbUVF fimbrial operon, which promotes adhesion of bacteria to different abiotic surfaces. Could be required for the biogenesis of the ElfA fimbriae | 0.816 |
| yciI | kch | b1251 | b1250 | annotation not available | Voltage-gated potassium channel; K(+)-specific ion channel. May play a role in the defense against osmotic shock | 0.840 |
| yciI | trpS | b1251 | b3384 | annotation not available | Tryptophanyl-trna synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Amino acylates tRNA(Trp) with both L- and D-tryptophan, although D-tryptophan is a poor substrate | 0.605 |
| yciI | ubiD | b1251 | b3843 | annotation not available | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis | 0.580 |
| yciI | yciN | b1251 | b1273 | annotation not available | annotation not available | 0.607 |
| yciI | ydcY | b1251 | b1446 | annotation not available | annotation not available | 0.613 |
| yciI | yihD | b1251 | b3858 | annotation not available | Uncharacterized protein; To H.influenzae HI_0845 | 0.610 |
| yciI | yoaB | b1251 | b1809 | annotation not available | Putative reactive intermediate deaminase; RutC family protein YoaB; Putative enzyme; Not classified; Belongs to the RutC family | 0.676 |
| yciI | yqiC | b1251 | b3042 | annotation not available | Required for efficient ubiquinone (coenzyme Q) biosynthesis under aerobic conditions . UbiK is probably an accessory factor of Ubi enzymes and facilitates ubiquinone biosynthesis by acting as an assembly factor, a targeting factor, or both . Dispensable for ubiquinone biosynthesis under anaerobiosis | 0.667 |
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