STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ynaJDUF2534 family putative inner membrane protein. (85 aa)    
Predicted Functional Partners:
yciU
UPF0263 family protein.
   
  
 0.809
yaiZ
DUF2754 family putative inner membrane protein.
      
 0.789
uspE
Stress-induced protein; Required for resistance to DNA-damaging agents.
   
  
 0.769
insH1-4
IS5 transposase and trans-activator.
     
 0.713
ynaI
Mechanosensitive channel protein, very small conductance; Mechanosensitive channel that protects cells against hypoosmotic stress when highly overexpressed. Belongs to the MscS (TC 1.A.23) family.
     
 0.652
tauC
Taurine ABC transporter permease; Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
      
 0.620
yobA
CopC family protein.
  
    0.611
yehS
DUF1456 family protein.
   
  
 0.597
ybdJ
DUF1158 family putative inner membrane protein.
   
  
 0.542
yedF
Putative TusA family sulfurtransferase; Belongs to the sulfur carrier protein TusA family.
      
 0.530
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.