STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sieBPhage superinfection exclusion protein, rac prophage; Phage superinfection exclusion protein (162 aa)    
Predicted Functional Partners:
kilR
Rac prophage; inhibitor of ftsz, killing protein; Causes inhibition of cell division. At high levels of expression, can also abolish the rod shape of the cells. Division inhibition by KilR can be relieved by overexpression of the cell division protein FtsZ
   
  
 0.786
ydaU
Rac prophage; duf1376 domain-containing protein ydau; Uncharacterized protein YdaU; Phage or Prophage Related
      
 0.735
racR
Rac prophage; dna-binding transcriptional repressor racr; Repressor protein for rac prophage
   
  
 0.701
ydaT
Rac prophage; protein ydat; Uncharacterized protein YdaT; Phage or Prophage Related
   
  
 0.625
ydaS
Rac prophage; toxin ydas; Uncharacterized protein YdaS; Phage or Prophage Related
      
 0.604
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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