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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydcKUncharacterized acetyltransferase YdcK; Putative enzyme; Not classified; Belongs to the transferase hexapeptide repeat family (326 aa)    
Predicted Functional Partners:
msyB
Acidic protein that suppresses heat sensitivity of a secy mutant; Could participate in the normal pathway of protein export
   
  
 0.906
tehA
Potassium-tellurite ethidium and proflavin transporter; Responsible for potassium tellurite resistance when present in high copy number. Ion channel involved in potassium tellurite resistance (By similarity). Otherwise, phenotypically silent
 
     0.857
yncG
Uncharacterized GST-like protein YncG; Putative enzyme; Not classified; Belongs to the GST superfamily. Beta family
   
  
 0.834
ysaB
annotation not available
  
     0.784
cedA
Cell division activator; Activates the cell division inhibited by chromosomal DNA over-replication
  
 
   0.781
ydcY
annotation not available
  
     0.780
yidG
annotation not available
  
     0.775
ydhZ
Uncharacterized protein; In vitro catalyzes the addition of water to fumarate, forming malate. Cannot catalyze the reverse reaction. Cannot use the cis-isomer maleate as substrate
  
     0.764
yaiZ
annotation not available
  
     0.755
rna
Ribonuclease i (enterobacter ribonuclease); One of the few RNases that cleaves the phosphodiester bond between any two nucleotide. Shows a preference for cytidylic or guanylic acid
  
     0.743
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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