STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yncHannotation not available (70 aa)    
Predicted Functional Partners:
yncG
Uncharacterized GST-like protein YncG; Putative enzyme; Not classified; Belongs to the GST superfamily. Beta family
  
  
 0.916
ycgY
annotation not available
      
 0.889
ybeT
annotation not available
      
 0.887
yebY
annotation not available
      
 0.877
ycjO
Probably part of the binding-protein-dependent transport system YcjNOP. Probably responsible for the translocation of the substrate across the membrane
      
 0.873
yiiR
annotation not available
      
 0.872
hyfJ
Possible component of hydrogenase 4.
      
 0.870
yafL
Probable endopeptidase YafL; Putative lipoprotein
      
 0.828
yeaE
Uncharacterized protein YeaE; Putative an aldehyde reductase
      
 0.786
yigB
Catalyzes the dephosphorylation of 5-amino-6-(5-phospho-D- ribitylamino)uracil, and thus could be involved in the riboflavin biosynthesis pathway . Is also able to dephosphorylate flavin mononucleotide (FMN) and other phosphoric acid esters . YigB is important for the formation of dormant persister cells .
      
 0.731
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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