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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydeNPutative ser-type periplasmic non-aryl sulfatase; Belongs to the sulfatase family (560 aa)    
Predicted Functional Partners:
ydeM
Putative anaerobic sulfatase maturation enzyme ydem; Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family
 
  
 0.973
yaeH
DUF3461 domain-containing protein YaeH; Belongs to the UPF0325 family
      
 0.705
ytfQ
Galactofuranose abc transporter periplasmic binding protein; Part of the ABC transporter complex YtfQRT-YjfF involved in galactofuranose transport (Probable). Binds to both alpha- and beta- galactofuranose
    
 
 0.697
ydcH
annotation not available
   
  
 0.695
malI
Laci family transcriptional regulator, maltose regulon regulatory protein; Repressor for the malX and malY genes. Also regulates its own expression. Binds maltose as an inducer
      
 0.640
yhiJ
annotation not available
      
 0.619
yfbM
annotation not available
  
   
 0.614
aslB
Putative anaerobic sulfatase maturation enzyme aslb; Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family
 
   
 0.581
yfdE
Acetyl-coa:oxalate coa-transferase; Involved in the catabolism of oxalate and in the adapatation to low pH. ACOCT serves to prime the oxalate-induced acid tolerance response (ATR) cycle by producing substrate for oxalyl-CoA decarboxylase (OXC) and formyl-coenzyme A transferase (FCOCT). Catalyzes the reversible conversion of acetyl-CoA and oxalate to oxalyl-CoA and acetate. It can also use formyl-CoA and oxalate to produce oxalyl-CoA and formate with significantly reduced specific activity
  
   
 0.574
hdeD
annotation not available
 
   
 0.568
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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