STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydeSPutative fimbrial-like protein. (176 aa)    
Predicted Functional Partners:
ydeR
Putative fimbrial-like protein.
  
 
 0.997
ydeQ
Putative adhesin; similar to FimH protein.
  
  
 0.986
yehC
Putative periplasmic pilin chaperone; Part of the yehABCD fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches.
    
 
 0.773
yehD
Putative fimbrial-like adhesin protein; Part of the yehABCD fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches.
      
 0.731
elfD
Putative periplasmic pilin chaperone; Part of the elfADCG-ycbUVF fimbrial operon, which promotes adhesion of bacteria to different abiotic surfaces. Could be required for the biogenesis of the ElfA fimbriae; Belongs to the periplasmic pilus chaperone family.
  
 
 0.719
yfbO
Uncharacterized protein.
      
 0.623
pyrI
Aspartate carbamoyltransferase, regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase; Belongs to the PyrI family.
      
 0.541
ybgD
Putative fimbrial-like protein; Belongs to the fimbrial protein family.
   
  
 0.525
yfbN
Uncharacterized protein.
   
  
 0.523
yadM
Putative fimbrial-like adhesin protein; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches.
   
  
 0.513
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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