Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
hokD | rem | b1562 | b1561 | Qin prophage; Toxic component of a type I toxin-antitoxin (TA) system (Probable). When overexpressed kills cells within 2 minutes; causes collapse of the transmembrane potential and arrest of respiration. | Qin prophage; uncharacterized protein. | 0.437 |
quuQ | rem | b1559 | b1561 | Qin prophage; Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes (By similarity). | Qin prophage; uncharacterized protein. | 0.536 |
quuQ | ydfU | b1559 | b1560 | Qin prophage; Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes (By similarity). | Qin prophage; uncharacterized protein. | 0.798 |
rem | hokD | b1561 | b1562 | Qin prophage; uncharacterized protein. | Qin prophage; Toxic component of a type I toxin-antitoxin (TA) system (Probable). When overexpressed kills cells within 2 minutes; causes collapse of the transmembrane potential and arrest of respiration. | 0.437 |
rem | quuQ | b1561 | b1559 | Qin prophage; uncharacterized protein. | Qin prophage; Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes (By similarity). | 0.536 |
rem | ydfU | b1561 | b1560 | Qin prophage; uncharacterized protein. | Qin prophage; uncharacterized protein. | 0.438 |
ydfU | quuQ | b1560 | b1559 | Qin prophage; uncharacterized protein. | Qin prophage; Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes (By similarity). | 0.798 |
ydfU | rem | b1560 | b1561 | Qin prophage; uncharacterized protein. | Qin prophage; uncharacterized protein. | 0.438 |