Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| holE | thiK | b1842 | b1106 | Dna polymerase iii subunit theta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity | Thiamine kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate | 0.565 |
| holE | yhhL | b1842 | b3466 | Dna polymerase iii subunit theta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity | annotation not available | 0.771 |
| holE | yidQ | b1842 | b3688 | Dna polymerase iii subunit theta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity | DUF1375 domain-containing putative lipoprotein YidQ; To E.coli YceK | 0.622 |
| holE | yjaH | b1842 | b4001 | Dna polymerase iii subunit theta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity | annotation not available | 0.586 |
| holE | ynfB | b1842 | b1583 | Dna polymerase iii subunit theta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity | annotation not available | 0.770 |
| holE | ypfN | b1842 | b4547 | Dna polymerase iii subunit theta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity | annotation not available | 0.762 |
| holE | yqjK | b1842 | b3100 | Dna polymerase iii subunit theta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity | annotation not available | 0.690 |
| speG | ynfA | b1584 | b1582 | Spermidine n(1)-acetyltransferase; Involved in the protection against polyamine toxicity by regulating their concentration . Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to the primary amino groups of spermidine to yield N(1)- and N(8)-acetylspermidine . It can also use polyamines such as spermine, but not putrescine | annotation not available | 0.507 |
| speG | ynfB | b1584 | b1583 | Spermidine n(1)-acetyltransferase; Involved in the protection against polyamine toxicity by regulating their concentration . Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to the primary amino groups of spermidine to yield N(1)- and N(8)-acetylspermidine . It can also use polyamines such as spermine, but not putrescine | annotation not available | 0.985 |
| thiK | holE | b1106 | b1842 | Thiamine kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate | Dna polymerase iii subunit theta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity | 0.565 |
| thiK | yhhL | b1106 | b3466 | Thiamine kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate | annotation not available | 0.526 |
| thiK | yidQ | b1106 | b3688 | Thiamine kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate | DUF1375 domain-containing putative lipoprotein YidQ; To E.coli YceK | 0.747 |
| thiK | yjaH | b1106 | b4001 | Thiamine kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate | annotation not available | 0.770 |
| thiK | ynfB | b1106 | b1583 | Thiamine kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate | annotation not available | 0.745 |
| thiK | ypfN | b1106 | b4547 | Thiamine kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate | annotation not available | 0.710 |
| thiK | yqjK | b1106 | b3100 | Thiamine kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate | annotation not available | 0.674 |
| yedD | ynfB | b1928 | b1583 | annotation not available | annotation not available | 0.814 |
| yhhL | holE | b3466 | b1842 | annotation not available | Dna polymerase iii subunit theta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity | 0.771 |
| yhhL | thiK | b3466 | b1106 | annotation not available | Thiamine kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate | 0.526 |
| yhhL | yidQ | b3466 | b3688 | annotation not available | DUF1375 domain-containing putative lipoprotein YidQ; To E.coli YceK | 0.720 |
page 1 of 4
