STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ynfBannotation not available (113 aa)    
Predicted Functional Partners:
speG
Involved in the protection against polyamine toxicity by regulating their concentration . Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to the primary amino groups of spermidine to yield N(1)- and N(8)-acetylspermidine . It can also use polyamines such as spermine, but not putrescine . ECO:0000269|PubMed:6297970, ECO:0000269|PubMed:7052085,
  
  
 0.985
yedD
annotation not available
  
   
 0.814
ynfA
annotation not available
     
 0.783
yhhL
annotation not available
  
   
 0.778
holE
DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
  
    0.770
ypfN
annotation not available
  
     0.764
yjaH
annotation not available
  
     0.763
yidQ
To E.coli YceK
  
     0.759
yqjK
annotation not available
  
     0.756
thiK
Catalyzes the phosphorylation of thiamine to thiamine phosphate
  
     0.745
Your Current Organism:
Escherichia coli K12 MG1655
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli K12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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